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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
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Posts
A reading list for population genetics
Published:
A solid understanding of population genetics theory is necessary and essential for correct interpretation of genomic data and patterns. Here I compiled a list of papers that I found helpful to build up the knowledge foundation for understanding the theory and analytical methods. (This list will be continuously updated.)
Install old Java version for running PGDSpider on mac
Published:
PGDSpider is a very popular data conversion tool to prepare files for population genetic and phylogenetic programs. However, it did’t work anymore after I updated my mac (macOS 13.6, intel 2018). Today I finally figured installing an old Java version will do the job.
macOS open/save window resize automatically
Published:
Last week I updated my macOS system to latest Ventura 13.4 and I love it very much as I didn’t seem to find any issues in running my programs. However, today I encountered an unexpected issue: the save window keeps getting longer when I use MEGA11 to export fasta file from ab1 file (i.e. raw file from sanger sequencing). I have 54 new ab1 files to examine and this issue very quickly becomes a pain for me.
Fix MEGA11 nexus file for MrBayes
Published:
I used to use PGDspider to convert fasta file to nexus file for phylogenetic analysis in MrBayes. However, after updating my macOS system, the java is not working anymore and thus PGDspider is not an option for me.
Fluorescent wildlife & fluorescent objects
Published:
In this year’s intense field season, I found something super cool that frog bones and eyes glow under my UV torchlight, and so as many lichens and fungi.
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
publications
Paper Title Number 1
Published in Journal 1, 2009
This paper is about the number 1. The number 2 is left for future work.
Recommended citation: Your Name, You. (2009). "Paper Title Number 1." Journal 1. 1(1). http://academicpages.github.io/files/paper1.pdf
Paper Title Number 2
Published in Journal 1, 2010
This paper is about the number 2. The number 3 is left for future work.
Recommended citation: Your Name, You. (2010). "Paper Title Number 2." Journal 1. 1(2). http://academicpages.github.io/files/paper2.pdf
Paper Title Number 3
Published in Journal 1, 2015
This paper is about the number 3. The number 4 is left for future work.
Recommended citation: Your Name, You. (2015). "Paper Title Number 3." Journal 1. 1(3). http://academicpages.github.io/files/paper3.pdf
talks
Talk 1 on Relevant Topic in Your Field
Published:
This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.